Supporting Information for
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1 Supporting Information for Hydrogen-Bridged Digermyl and Germylsilyl Cations N. Kordts, C. Borner, R. Panisch, W. Saak, T. Müller* Contents. 1. Computational Details 2. IR Spectroscopic Results 3. NMR-Spectroscopic Results. 3.1 NMR spectra of compound NMR spectra of compound NMR spectra of compound 7[B(C 6 F 5 ) 4 ] 3.4 NMR spectra of compound 8[B(C 6 F 5 ) 4 ] F NMR spectra of hydrodefluorination reactions. 4. Crystallographic Results for 7[B(C 6 F 5 ) 4 ] 5. References.
2 1. Computational Details. All calculations were done using either the Gaussian03 Rev D.02 or the Gaussian09 Rev. B.01 package of programs. 1 The molecular structures of the cations 2, 7 and 8, were optimized using the nonlocal DFT level of theory, Becke s three-parameter hybrid functional and the LYP correlation (B3LYP 2 ) along with cc-pvtz basis set 3 for all elements. Subsequent frequency calculations at this level of theory verified these structures as minima (zero imaginary frequencies) on the potential energy surface (PES). The Atoms-in-Molecules analysis was done with the AIMALL program 4 applying wavefunctions obtained from single point calculations at the B3LYP/cc-pvtz level of theory. The data are summarized in Tables S-1 (Absolute Energies) and S-3 (Cartesian Coordinates). For calculation of the NMR chemical shifts the GIAO method 5 was used. The M06L functional 6 in connection with the 6-311G(2d,p) basis set was applied on molecular structures optimized at the B3LYP/cc-pvtz level. Computed NMR chemical shieldings were transferred to the chemical shift scale using the NMR chemical shielding of tetramethylsilane (σ(si)(sime 4 ) = 362.1). J-coupling constants were computed at the same level of theory using a modified 6-311G(2d,p) basis set to ensure a better description of the Fermi Contact contribution to coupling constant J. 7 The following atomic units have been used: Elementary charge: 1 au = e = C Charge density ρ : 1 au = e a 0-3 = Cm -3 Laplacian of the charge density 2 ρ : 1 au = e a 0-5 = Cm -5 Energy E : 1 au = e 2 a 0-1 = kj mol -1 Length : 1 au = 1 bohr = pm Energy : 1 au = E h = kj mol -1 Table S1. Calculated absolute energies E, free Gibbs enthalpies G 298 (at 298K, 0.1 MPa) and wavenumbers ν of the asymmetric E-H-E vibration of hydronium ions. Cpd. E [au] G 298 [au] ν as (E-H-E) [cm -1 ] [(Et 3 Si) 2 H] [(Et 3 Ge) 2 H]
3 Table S2. Calculated molecular structures of hydroniumions. Cation 7. B3LYP/cc-pvtz Standard orientation: Center Atomic Atomic Coordinates (Angstroms) Number Number Type X Y Z
4 Cation 8. B3LYP/cc-pvtz Standard orientation: Center Atomic Atomic Coordinates (Angstroms) Number Number Type X Y Z
5 Cation 2. B3LYP/cc-pvtz Standard orientation: Center Atomic Atomic Coordinates (Angstroms) Number Number Type X Y Z [(Et 3Si) 2H] + B3LYP/cc-pvtz Standard orientation: Center Atomic Atomic Coordinates (Angstroms) Number Number Type X Y Z
6 [(Et 3Ge) 2H] + B3LYP/cc-pvtz Standard orientation: Center Atomic Atomic Coordinates (Angstroms) Number Number Type X Y Z
7 2. IR-Spectroscopic Results. For assignment of the IR bands of hydronium ions 7 and 8, their molecular structures were optimized at the B3LYP/cc-pvtz level of theory and subsequent frequency calculations were used to determine the position of the asymmetric E-H-E stretch vibration. To account for anharmonicity effects a scaling factors for the E-H-E vibration was determined from the correlation of the computed data and the experimental results for cations 2, 7, 8, [Et 3 SiHSiEt 3 ] + and [Et 3 GeHGeEt 3 ] + 8 From this correlation a scaling factor of was determined (see Figure S1). The global scaling factor for wavenumbers of vibrations computed at B3LYP/cc-pvtz was previously determined to be Figure S1. Correlation between the experimental wavenumber of the ν as (E-H-E) vibration (E= Si, Ge) and computed data and calculated data obtained at B3LYP/cc-pvtz. The line of best fit (black) is given by the following equation: ν calc = ν exp. Figure S2. Comparison between experimental (neat, ATR) and computed IR spectra (B3LYP/cc-pvtz, line width: 4 cm -1 ) of hydronium borates 7[B(C 6 F 5 ) 4 ] (a), 8[B(C 6 F 5 ) 4 ] (b) and 2[B(C 6 F 5 ) 4 ] (c); (blue trace: experimental data, red trace: computed data for [B(C 6 F 5 ) 4 ] - ; black trace: computed data for cations 7, 8 and 2).
8 3. NMR-Spectroscopic Results. 3.1 NMR spectra of compound 10 Figure S MHz 1 H NMR spectrum of 10 in C 6 D 6 at 305 K; δ 1 H = ; #: C 6 D 5 H; +: impurity. Figure S MHz 13 C{ 1 H} NMR spectrum of 10 in C 6 D 6 at 305 K; δ 13 C = 145-0; #: C 6 D 5 H; +: impurity; unknown substance at δ 13 C = 15.1, 26.7, 29.1.
9 3.2 NMR spectra of compound 12 Figure S MHz 1 H NMR spectrum of 12 in C 6 D 6 at 305 K; δ 1 H = ; #: δ 1 H(C 6 D 6 ) = 7.20; o: signals of 1-Dimethylsilylnaphthalene. Figure S MHz 13 C{ 1 H} NMR spectrum of 12 in C 6 D 6 at 305 K; δ 13 C = 150-(-5); #: δ 13 C(C 6 D 6 ) = 128.0; o: signals of 1-Dimethylsilylnaphthalene.
10 Figure S7. 99 MHz 29 Si{ 1 H}-INEPT NMR spectrum of 12 in C 6 D 6 at 305 K; δ 29 Si = -8-(-31); o: signals of 1-Dimethylsilylnaphthalene.
11 3.3 NMR spectra of compound 7[B(C 6 F 5 ) 4 ] Figure S MHz 1 H NMR spectrum of 7[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 1 H = ; #: C 6 D 5 H; +: decomposition. Figure S MHz 13 C{ 1 H} NMR spectrum of 7[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 13 C = ; #: C 6 D 5 H; o: signals of [B(C 6 F 5 ) 4 ] -.
12 Figure S10. Part of the 500 MHz 1 H/ 1 H COSY NMR spectrum of 7[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 1 H (f2) = ; δ 1 H (f1) = Figure S11. Part of the 1 H 13 C HMBC NMR spectrum of 7[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 1 H (f2) = ; δ 13 C (f2) =
13 3.4 NMR spectra of compound 8[B(C 6 F 5 ) 4 ] Figure S MHz 1 H NMR spectrum of 8[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 1 H = ; #: C 6 D 5 H; +: impurity. Figure S MHz 13 C{ 1 H} NMR spectrum of 8[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 13 C = 151- (-0.5); #: C 6 D 5 H; o: signals of [B(C 6 F 5 ) 4 ] -.
14 Figure S MHz 29 Si{ 1 H} INEPT NMR spectrum of 8[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 29 Si = 80-(-50); +: impurity; reference against external Si(CH 3 ) 4. Insert: 99 MHz 29 Si INEPT NMR spectrum of 2[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 29 Si = Figure S15. Part of the 500 MHz 1 H / 1 H COSY NMR spectrum of 8[B(C 6 F 5 ) 4 ] in C 6 D 6 at 305 K; δ 1 H (f2) = ; δ 1 H(f1) =
15 4. Crystallographic Results for 7[B(C 6 F 5 ) 4 ] Empirical formula C50 H43 B F20 Ge2 Formula weight Temperature 120(2) K Wavelength Å Crystal system Monoclinic Space group Cc Unit cell dimensions a = (8) Å α= 90. b = (6) Å β= (2). c = (7) Å γ = 90. Volume (3) Å 3 Z 4 Density (calculated) Mg/m 3 Absorption coefficient mm -1 F(000) 2368 Crystal size 0.47 x 0.26 x 0.19 mm 3 Theta range for data collection 1.91 to Index ranges -25<=h<=27, -20<=k<=21, -25<=l<=24 Reflections collected Independent reflections (R(int) = ) Observed reflections (>2sigma(I)) Completeness to theta = % Absorption correction Numerical Max. and min. transmission and Refinement method Full-matrix least-squares on F 2 Data / restraints / parameters / 2 / 665 Goodness-of-fit on F Final R indices (I>2sigma(I)) R1 = , wr2 = R indices (all data) R1 = , wr2 = Absolute structure parameter 0.007(4) Largest diff. peak and hole and e.å -3
16 5. References (1) a) Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, Jr., J. A.; Vreven, T.; Kudin, K. N.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li, X.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; and Pople, J. A Gaussian Inc., 2004, Wallingford, Connecticut; (b) Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Scalmani, G.; Barone, V.; Mennucci, B.; Petersson, G. A.; Nakatsuji, H.; Caricato, M.; Li, X.; Hratchian, H. P.; Izmaylov, A. F.; Bloino, J.; Zheng, G.; Sonnenberg, J. L.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Vreven, T.; Montgomery, Jr., J. A.; Peralta, J. E.; Ogliaro, F.; Bearpark, M.; Heyd, J. J.; Brothers, E.; Kudin, K. N.; Staroverov, V. N.; Kobayashi, R.; Normand, J.; Raghavachari, K.; Rendell, A.; Burant, J. C.; Iyengar, S. S.; Tomasi, J.; Cossi, M.; Rega, N.; Millam, J. M.; Klene, M.; Knox, J. E.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Martin, R. L.; Morokuma, K.; Zakrzewski, V. G.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Dapprich, S.; Daniels, A. D.; Farkas, Ö.; Foresman, J. B.; Ortiz, J. V.; Cioslowski, J.; Fox, D. J. Gaussian Inc., 2010, Wallingford, Connecticut. (2) (a) Becke, A. D. Phys. Rev. A 1988, 38, 3098-; b) Lee, C.; Yang, W.; Parr, R. G.Phys. Rev. B, 1988, 37, 785; c) Miehlich, B.; Savin, A.; Stoll, H.; Preuss, H. Chem. Phys. Lett., 1989, 157, 200. (3) (a) Dunning T. H. J. Chem. Phys. 1989, 90, b) Kendall, R. A.; Dunning, T. H.; Harrison, R. J. J. Chem. Phys. 1992, 96, c) Woon, D. E.; Dunning, T. H. J. Chem. Phys., 1993, 98, (4) AIMAll (Version ), Keith, T. A.; (5) (a) Ditchfield, R. Mol. Phys. 1974, 27, 789. b) Cheeseman, J. R.; Trucks, G. W.; Keith, T. A.; Frisch, M. J. J. Chem. Phys. 1996, 104, (6) (a) Zhao, Y.; Truhlar, D. G. J. Chem. Phys. 2006, 125, : 1. b) Zhao, Y.; Truhlar, D. G. Theor. Chem. Acc. 2008, 120, 215. (7) Deng, W.; Cheesemann, J. R.; Frisch, M. J. J. Chem. Theory. Comput. 2006, 2, (8) Wright II, J. H.; Mueck, G. W.; Tham, F. S. Reed, C. A. Organometallics 2010, 29, (9) Sinha, P.; Boesch, S. E.; Gu, C.; Wheeler, R. A.; Wilson, A. K. J. Phys. Chem. A 2004, 108, 9213.
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