Mouhamadou Birame Diop, a * Libasse Diop a and Allen G. Oliver b
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1 Dimethyl N-cyanodithioiminocarbonate data reports ISSN Mouhamadou Birame Diop, a * Libasse Diop a and Allen G. Oliver b a Laboratoire de Chimie Minérale et Analytique, Département de Chimie, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal, and b Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN , USA. *Correspondence mouhamadoubdiop@gmail.com Received 18 February 2016 Accepted 16 March 2016 Edited by H. Stoeckli-Evans, University of Neuchâtel, Switzerland Keywords: crystal structure; cyano; thioate; C HN hydrogen bonds. The title compound, C 4 H 6 N 2 S 2, crystallizes with four independent molecules in the asymmetric unit. Two of the molecules are disordered about a pseudo twofold rotation axis. The mean values of the C N bonds are (5) Å for C N, (5) Å for C N and (5) Å for the C N single bond. In the crystal, molecules are linked via C HN hydrogen bonds, forming slabs parallel to the bc plane. CCDC reference: Structural data: full structural data are available from iucrdata.iucr.org Structure description Dimethyl cyaniminodithiocarbamate with its potential coordination power two N and two S atoms has been scarcely studied. To the best of our knowledge, only two crystalline structures incorporating this ligand are known, viz. catena-[bis( 2 -chloro)bis[2,2- bis(methylthio)-n-cyanoazomethine]copper(i)] (Kojić-Prodić et al., 1992) and dichloridobis(dimethyl N-cyanodithioiminocarbonate)cobalt (II) (Diop et al., 2016). In our study of new compounds containing this ligand, we have undertaken reactions between the title compound, dimethyl cyanocarbonimidodithioate, and CrO 2 Cl 2 expecting coordination to the Cr atom. However, only crystals of the title ligand were obtained and we report herein on its crystal structure. The molecular structures of the four independent molecules (A, B, C and D) of the title compound are illustrated in Fig. 1. Two of the molecules, B and D, were found to have a small, but significant amount of disorder in the position of the sulfur atoms. The imido nitrogen and cyanide carbon are disordered in these two molecules, reflecting the orientation change of the methylthiol chains (Fig. 1). Bond lengths and angles in the major component and fully occupied molecules are in the expected ranges (Diop et al., 2016) and show perfect planarity around the imido carbon atoms (average sum of angles is ). 1of3
2 Table 1 Hydrogen-bond geometry (Å, ). D HA D H HA DA D HA C4B H4BBN1B i (5) 147 C3D H3DBN1C ii (5) 149 C4D H4DAN1B iii (6) 166 Symmetry codes: (i) x; y þ 1 2 ; z þ 3 2 ; (ii) x þ 2; y; z þ 1; (iii) x þ 1; y; z. a small number of colourless crystals of the title compound were obtained. Figure 1 The molecular structure of the four independent molecules (A, B, C and D) of the title compound, with atom labelling. The minor components of the disordered molecules are shown with dashed bonds. Displacement ellipsoids are drawn at the 50% probability level. In the crystal, C HN hydrogen bonds link the four molecules, forming slabs that lie parallel to (100); see Table 1 and Fig. 2. Synthesis and crystallization Dimethyl cyanocarbonimidodithioate was mixed in acetonitrile with CrO 2 Cl 2 in a 1:1 ratio, giving a green solution. On slow evaporation of the solution at room temperature (303 K), Refinement Crystal data, data collection and structure refinement details are summarized in Table 2. The disordered components of molecules B and D were refined with the occupancy of the disorder components summed to unity. The occupancy of each molecule was refined separately yielding a 0.92:0.08 and 0.90:0.10 ratio. Despite this small percentage, there was a significant improvement in the model upon inclusion of this disorder. The atomic displacement parameters of the inherent minor disordered component present in the cyanide nitrogen and carbon atoms were restrained to be similar to those of the associated major component. Table 2 Experimental details. Crystal data Chemical formula C 4 H 6 N 2 S 2 M r Crystal system, space group Monoclinic, P2 1 /c Temperature (K) 120 a, b, c (Å) (18), (15), (18) ( ) (5) V (Å 3 ) (6) Z 16 Radiation type Mo K (mm 1 ) 0.69 Crystal size (mm) Data collection Diffractometer Bruker Kappa X8 APEXIII Absorption correction Multi-scan (SADABS; Krause et al., 2015) T min, T max 0.837, No. of measured, independent and 36932, 4868, 2986 observed [I > 2(I)] reflections R int (sin /) max (Å 1 ) Figure 2 The crystal packing of the title compound, viewed approximately along the b-axis direction. The four independent molecules (A green, B black, C blue, D red) are linked via C HN hydrogen bonds (dashed lines; see Table 1). Refinement R[F 2 >2(F 2 )], wr(f 2 ), S 0.048, 0.106, 1.07 No. of reflections 4868 No. of parameters 331 No. of restraints 24 H-atom treatment H-atom parameters constrained max, min (e Å 3 ) 0.86, 0.37 Computer programs: APEX3 (Bruker, 2015), SAINT (Bruker, 2015), SHELXT (Sheldrick, 2015a), PLATON (Spek, 2009), SHELXL2014 (Sheldrick, 2015b) and publcif (Westrip, 2010). 2of3 Diop et al. C 4 H 6 N 2 S 2
3 Acknowledgements The authors acknowledge the Cheikh Anta Diop University of Dakar (Senegal) and the University of Notre Dame (USA) for financial support. References Bruker. (2015). APEX-3 and SAINT. Bruker Nonius AXS Inc., Madison, Wisconsin, USA. Diop, M. B., Diop, L. & Oliver, A. G. (2016). Acta Cryst. E72, Kojić-Prodić, B., Kiralj, R., Zlata, R. & Šunjić, V. (1992). Vestn. Slov. Kem. Drus. (Bull. Slovenian Chem. Soc.), 39, Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, Sheldrick, G. M. (2015a). Acta Cryst. A71, 3 8. Sheldrick, G. M. (2015b). Acta Cryst. C71, 3 8. Spek, A. L. (2009). Acta Cryst. D65, Westrip, S. P. (2010). J. Appl. Cryst. 43, Diop et al. C 4 H 6 N 2 S 2 3of3
4 full crystallographic data [doi: /s ] Dimethyl N-cyanodithioiminocarbonate Mouhamadou Birame Diop, Libasse Diop and Allen G. Oliver Dimethyl N-cyanodithioiminocarbonate Crystal data C 4 H 6 N 2 S 2 M r = Monoclinic, P2 1 /c a = (18) Å b = (15) Å c = (18) Å β = (5) V = (6) Å 3 Z = 16 Data collection Bruker Kappa X8 APEXIII diffractometer Radiation source: fine-focus sealed tube Graphite monochromator Detector resolution: 8.33 pixels mm -1 ω and φ scans Absorption correction: multi-scan (SADABS; Krause et al., 2015) T min = 0.837, T max = Refinement Refinement on F 2 Least-squares matrix: full R[F 2 > 2σ(F 2 )] = wr(f 2 ) = S = reflections 331 parameters 24 restraints Primary atom site location: real-space vector search F(000) = 1216 D x = Mg m 3 Mo Kα radiation, λ = Å Cell parameters from 2731 reflections θ = µ = 0.69 mm 1 T = 120 K Plate, colourless mm measured reflections 4868 independent reflections 2986 reflections with I > 2σ(I) R int = θ max = 25.4, θ min = 1.4 h = k = l = Secondary atom site location: difference Fourier map Hydrogen site location: inferred from neighbouring sites H-atom parameters constrained w = 1/[σ 2 (F o2 ) + (0.0335P) P] where P = (F o 2 + 2F c2 )/3 (Δ/σ) max = Δρ max = 0.86 e Å 3 Δρ min = 0.37 e Å 3 Special details Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. data-1
5 Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å 2 ) x y z U iso */U eq Occ. (<1) S1A (6) (9) (7) (3) S2A (6) (9) (7) (3) N1A (2) (3) (3) (9) N2A (2) (3) (2) (8) C1A (3) (4) (3) (10) C2A (2) (3) (3) (9) C3A (2) (3) (3) (10) H3AA * H3AB * H3AC * C4A (3) (3) (3) (10) H4AA * H4AB * H4AC * S1B (7) (10) (8) (3) (2) S2B (7) (10) (8) (3) (2) N2B (2) (3) (2) (8) (2) C1B (3) (4) (3) (12) (2) S1BA (7) (9) (7) (3)* (2) S2BA (7) (8) (7) (3)* (2) N2BA (2) (3) (3) (3)* (2) C1BA (4) (5) (4) (3)* (2) N1B (2) (3) (2) (9) C2B (2) (3) (3) (9) C3B (3) (3) (3) (11) H3BA * (2) H3BB * (2) H3BC * (2) H3BD * (2) H3BE * (2) H3BF * (2) C4B (3) (3) (3) (11) H4BA * (2) H4BB * (2) H4BC * (2) H4BD * (2) H4BE * (2) H4BF * (2) S1C (7) (9) (7) (3) S2C (7) (9) (8) (3) N1C (2) (3) (2) (9) N2C (2) (3) (2) (8) C1C (3) (3) (3) (10) C2C (3) (3) (3) (9) C3C (3) (3) (3) (10) data-2
6 H3CA * H3CB * H3CC * C4C (2) (3) (3) (10) H4CA * H4CB * H4CC * S1D (7) (9) (8) (3) (2) S2D (7) (9) (8) (3) (2) N2D (2) (3) (2) (9) (2) C1D (4) (4) (4) (13) (2) S1DA (6) (9) (7) (3)* (2) S2DA (7) (9) (7) (3)* (2) N2DA (2) (3) (2) (3)* (2) C1DA (5) (5) (4) (3)* (2) N1D (2) (3) (3) (9) C2D (2) (3) (3) (9) C3D (3) (3) (3) (10) H3DA * (2) H3DB * (2) H3DC * (2) H3DD * (2) H3DE * (2) H3DF * (2) C4D (2) (3) (3) (10) H4DA * (2) H4DB * (2) H4DC * (2) H4DD * (2) H4DE * (2) H4DF * (2) Atomic displacement parameters (Å 2 ) U 11 U 22 U 33 U 12 U 13 U 23 S1A (5) (6) (6) (5) (4) (5) S2A (5) (6) (6) (5) (4) (5) N1A (2) (2) (2) (19) (18) (18) N2A (18) (2) (2) (16) (14) (16) C1A (2) (3) (3) (2) (19) (2) C2A (2) (3) (2) (18) (16) (17) C3A (2) (3) (3) (19) (19) (2) C4A (2) (2) (3) (19) (19) (2) S1B (6) (7) (7) (5) (5) (6) S2B (6) (8) (7) (5) (5) (6) N2B (2) (19) (2) (17) (15) (16) C1B (3) (3) (2) (2) (2) (2) N1B (2) (2) (2) (19) (17) (19) data-3
7 C2B (2) (3) (2) (19) (17) (19) C3B (2) (3) (3) (2) (19) (2) C4B (2) (3) (3) (2) (2) (2) S1C (6) (6) (6) (5) (5) (5) S2C (6) (6) (6) (5) (5) (5) N1C (2) (3) (2) (18) (17) (19) N2C (18) (2) (2) (18) (15) (17) C1C (3) (3) (3) (2) (2) (2) C2C (2) (2) (2) (18) (17) (17) C3C (3) (2) (3) (2) (2) (2) C4C (2) (2) (2) (19) (18) (19) S1D (6) (7) (7) (5) (5) (5) S2D (6) (7) (7) (5) (5) (6) N2D (19) (2) (2) (17) (16) (17) C1D (3) (3) (3) (3) (2) (2) N1D (2) (2) (2) (18) (17) (19) C2D (2) (2) (2) (18) (16) (17) C3D (2) (2) (2) (19) (18) (19) C4D (2) (3) (3) (2) (2) (2) Geometric parameters (Å, º) S1A C2A (4) S1C C2C (4) S1A C3A (4) S1C C3C (4) S2A C2A (4) S2C C2C (4) S2A C4A (4) S2C C4C (4) N1A C1A (5) N1C C1C (5) N2A C2A (5) N2C C2C (5) N2A C1A (5) N2C C1C (5) C3A H3AA C3C H3CA C3A H3AB C3C H3CB C3A H3AC C3C H3CC C4A H4AA C4C H4CA C4A H4AB C4C H4CB C4A H4AC C4C H4CC S1B C2B (4) S1D C2D (4) S1B C3B (4) S1D C3D (4) S2B C2B (4) S2D C2D (4) S2B C4B (4) S2D C4D (4) N2B C2B (5) N2D C2D (5) N2B C1B (6) N2D C1D (7) C1B N1B (6) C1D N1D (6) S1BA C4B (11) S1DA C2D (10) S1BA C2B (12) S1DA C4D (11) S2BA C2B (11) S2DA C2D (11) S2BA C3B (12) S2DA C3D (11) N2BA C2B 1.32 (4) N2DA C2D 1.36 (3) N2BA C1BA 1.55 (7) N2DA C1DA 1.43 (7) data-4
8 C1BA N1B 1.05 (6) C1DA N1D 1.06 (7) C3B H3BA C3D H3DA C3B H3BB C3D H3DB C3B H3BC C3D H3DC C3B H3BD C3D H3DD C3B H3BE C3D H3DE C3B H3BF C3D H3DF C4B H4BA C4D H4DA C4B H4BB C4D H4DB C4B H4BC C4D H4DC C4B H4BD C4D H4DD C4B H4BE C4D H4DE C4B H4BF C4D H4DF C2A S1A C3A (2) C2C S1C C3C (19) C2A S2A C4A (19) C2C S2C C4C (19) C2A N2A C1A (3) C2C N2C C1C (4) N1A C1A N2A (4) N1C C1C N2C (5) N2A C2A S1A (3) N2C C2C S1C (3) N2A C2A S2A (3) N2C C2C S2C (3) S1A C2A S2A (2) S1C C2C S2C (2) S1A C3A H3AA S1C C3C H3CA S1A C3A H3AB S1C C3C H3CB H3AA C3A H3AB H3CA C3C H3CB S1A C3A H3AC S1C C3C H3CC H3AA C3A H3AC H3CA C3C H3CC H3AB C3A H3AC H3CB C3C H3CC S2A C4A H4AA S2C C4C H4CA S2A C4A H4AB S2C C4C H4CB H4AA C4A H4AB H4CA C4C H4CB S2A C4A H4AC S2C C4C H4CC H4AA C4A H4AC H4CA C4C H4CC H4AB C4A H4AC H4CB C4C H4CC C2B S1B C3B (2) C2D S1D C3D (18) C2B S2B C4B (2) C2D S2D C4D (19) C2B N2B C1B (4) C2D N2D C1D (4) N1B C1B N2B (5) N1D C1D N2D (5) C4B S1BA C2B (6) C2D S1DA C4D (6) C2B S2BA C3B (6) C2D S2DA C3D (6) C2B N2BA C1BA 110 (4) C2D N2DA C1DA 111 (4) N1B C1BA N2BA 177 (5) N1D C1DA N2DA 159 (6) N2BA C2B S2BA (19) N2DA C2D S2DA (16) N2B C2B S1B (3) N2D C2D S1D (3) N2B C2B S2B (3) N2D C2D S2D (3) S1B C2B S2B (2) S1D C2D S2D (2) N2BA C2B S1BA (19) N2DA C2D S1DA (16) S2BA C2B S1BA (6) S2DA C2D S1DA (5) S1B C3B H3BA S1D C3D H3DA data-5
9 S1B C3B H3BB S1D C3D H3DB H3BA C3B H3BB H3DA C3D H3DB S1B C3B H3BC S1D C3D H3DC H3BA C3B H3BC H3DA C3D H3DC H3BB C3B H3BC H3DB C3D H3DC S2BA C3B H3BD S2DA C3D H3DD S2BA C3B H3BE S2DA C3D H3DE H3BD C3B H3BE H3DD C3D H3DE S2BA C3B H3BF S2DA C3D H3DF H3BD C3B H3BF H3DD C3D H3DF H3BE C3B H3BF H3DE C3D H3DF S2B C4B H4BA S2D C4D H4DA S2B C4B H4BB S2D C4D H4DB H4BA C4B H4BB H4DA C4D H4DB S2B C4B H4BC S2D C4D H4DC H4BA C4B H4BC H4DA C4D H4DC H4BB C4B H4BC H4DB C4D H4DC S1BA C4B H4BD S1DA C4D H4DD S1BA C4B H4BE S1DA C4D H4DE H4BD C4B H4BE H4DD C4D H4DE S1BA C4B H4BF S1DA C4D H4DF H4BD C4B H4BF H4DD C4D H4DF H4BE C4B H4BF H4DE C4D H4DF C1A N2A C2A S1A (3) C1C N2C C2C S2C 0.9 (5) C1A N2A C2A S2A 0.4 (5) C3C S1C C2C N2C 0.1 (4) C3A S1A C2A N2A 0.0 (4) C3C S1C C2C S2C (2) C3A S1A C2A S2A (2) C4C S2C C2C N2C (3) C4A S2A C2A N2A (3) C4C S2C C2C S1C 3.8 (3) C4A S2A C2A S1A 5.4 (3) C2D N2DA C1DA N1D 149 (15) C1B N2B C2B S1B (3) C1D N2D C2D S1D (4) C1B N2B C2B S2B 0.5 (5) C1D N2D C2D S2D 2.6 (5) C1BA N2BA C2B S2BA 5 (4) C1DA N2DA C2D S2DA 11 (4) C1BA N2BA C2B S1BA 180 (3) C1DA N2DA C2D S1DA 179 (3) C3B S2BA C2B N2BA 176 (2) C3D S2DA C2D N2DA (17) C3B S2BA C2B S1BA 0.5 (9) C3D S2DA C2D S1DA 6.8 (8) C3B S1B C2B N2B 0.6 (4) C3D S1D C2D N2D 3.6 (4) C3B S1B C2B S2B (2) C3D S1D C2D S2D (2) C4B S2B C2B N2B (3) C4D S2D C2D N2D (3) C4B S2B C2B S1B 1.2 (3) C4D S2D C2D S1D 0.2 (3) C4B S1BA C2B N2BA 9.0 (18) C4D S1DA C2D N2DA 17.2 (17) C4B S1BA C2B S2BA (5) C4D S1DA C2D S2DA (6) C1C N2C C2C S1C (3) Hydrogen-bond geometry (Å, º) D H A D H H A D A D H A C4B H4BB N1B i (5) 147 data-6
10 C3D H3DB N1C ii (5) 149 C4D H4DA N1B iii (6) 166 Symmetry codes: (i) x, y+1/2, z+3/2; (ii) x+2, y, z+1; (iii) x+1, y, z. data-7
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