Genetic Rela tion sh ip of Som e Cultivars of Petun ia Hybr ids Using SRAP M arker

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1 2008, 35 (12) : Acta Horticulturae Sinica SRAP 1, 1, 2, 2, 2, 13 ( 1, ; 2, ) : SRAP ( sequence2related amp lified polymorphism) 88 58, 20, 389, 1915, 13 40, Jaccardπs , 1, 2, 3 4, : ; SRAP; : S 681: A : X (2008) Genetic Rela tion sh ip of Som e Cultivars of Petun ia Hybr ids Using SRAP M arker XU J in 1, ZHANG Xi2xi 1, 2, DONG A i2xiang 2, WANG Tao 2, and ZHAO L iang2jun 13 ( 1 D epartm ent of O rnam ental Horticulture and Landscape A rchitecture, China A gricultural U niversity, B eijing , China; 2 B eijing Institute of Horticulture and Gardening, B eijing , China) Abstract: In this paper, the molecular m arker system 2SRAP ( sequence2related amp lified polymorphism) was firstly app lied on 58 petunia hybridsπgenetic relationship research. The results obtained was as follow s: 20 p rimer pairs selected from 88 p rimer pairs amp lified 389 polymorphic bands with an average of 1915 polymor2 phic bands per p rimer pair, and the number of bands amp lified by each p rimer pair was ranged from 13 to 40. Moreover, Jaccardπs sim ilarity coefficient ranged from 0155 to Fifty2eight cultivars could be divided into 4 group s when the genetic distance was The first group mainly included warm colour serieses, and yellow flower cultivars were in the second group, while cold colour cultivars were clustered in the third and fourth group. In addition, the white colour cultivars were clustered in a w ide range. Key words: Petun ia hybrida; SRAP; genetic relationship ( Petunia hybrida V ilm. ) 80,,, Cerny (1996) DAF (DNA2amp lification fingerp rinting) 5 10, DNA RAPD AFLP, RAPD, AFLP,, SRAP ( sequence2related am2 p lified polymorphism ) SRAP ORFs(open reading frames) 17 : ; : : (D ) 3 Author for correspondence ( E2mail: zhaolj5073@1631com)

2 bp, 5 10 bp, CCGG 3 3,, 18 bp, 5 11 bp, AATT 3 3, (L i & Quiros, 2001;, 2007), SRAP ( Ferriol et al., 2003, 2004;, 2005;, 2007;, 2007;, 2007), SRAP,, 1 111D NA , 58 ( 1) CTABDNA, DNA No. Cultivar 1 58 Table 1 Nam e and resource of 58 cultivars 3 Resource 3 No. Cultivar 1 D ream s Raki Red Lace a 30 Prism Red d 2 D ream s Trout Reda a 31 Hurrah B lue Stripe d 3 D ream s Red a 32 Hurrah Pink d 4 D ream s Rose Red Lace a 33 Hurrah Rose Red d 5 D ream s Rose Red a 34 Hurrah Pink Stripe d 6 D ream s Pink a 35 A laddin Red f 7 Primetime B lue b 36 A laddin Raki Red f 8 Primetime Red b 37 A laddin Rose Red f 9 Primetime Scarlet b 38 Frost Velvet f 10 Primetime W hite b 39 Frost Flam ing f 11 Primetime Pink b 40 Frost Cherry Red f 12 Primetime Rose Red b 41 B ravo Pink e 13 U ltra B lue Lace b 42 B ravo W hite e 14 U ltra Red b 43 B ravo B lue e 15 U ltra Pink b 44 Feng Hua Purp le g 16 M irage Sp ring a 45 Feng Hua W hite g 17 M irage Summer a 46 Feng Hua Rose Red g 18 M irage Purp le a 47 Merlin Red h 19 M irage B lue Lace a 48 Merlin Pink h 20 M irage Rakired Lace a 49 Merlin Cherry Red h 21 Symphonyrose Red c 50 Frost B lue b 22 Symphonyred Lace c 51 Frost Rose R ing b 23 Symphony Red c 52 Double Cascade Rose Red a 24 Symphonyrose Red Lace c 53 Double Cascade Red a 25 Symphony B lue c 54 Super Cascade Red a 26 Prism Rose Red d 55 Super Cascade B lue a 27 Prism W hite d 56 Jing Guan Rose Red i 28 Prism Yellow d 57 Jing Guan Purp le i 29 Prism B lue d 58 Jing Guan Red i 3 Resource 3 3 : a. ; b. ; c. ; d. ; e. ; f. ; g. ; h. ; i. 3 : a. Pan American; b. Goldsm ith; c. Takii; d. Floranova; e. Syngenta; f. Bodger; g. Chifeng Gold Horticulture; h. Sakata; i. Beijing Institute of Horticulture and Gardening.

3 12 : SRAP SRAP2PCR SRAP Ferriol (2003) Budak (2004), 8(ME) 11 ( EM ) 88 5 DNA, 88, 113 PCR PCRB IOMETRA Tgradient PCR () Ferriol ( 2003) 20 L : 1017 L, Buffer 3 L, dntps 2 L ( 215 mmol L - 1 ), 1 L (10 mol L - 1 ), DNA 2 L (20 ngl - 1 ), rtaq 013 L (01075 UL - 1 ) (2007) (6% ) 114 ( % ) = / 100 ( % ) = / 100 Jaccardπs, NTSYS2pc 210, (UPGMA) : S ij = a /( a + b + c), a, bi, cj SRAP 88, 20 1 ME27 /EM 29 1 M E27 /EM 29 58() M. pbr322 marker; F ig. 1 The am plifica tion result of 58 petun ia hybr ids by the pr im er pa ir M E27 /EM 29 M. DNA marker (pbr322) ; Cultivar number are the same as Table 1. A rrows show polymorphic bands.

4 DNASRAP, ( 2), 13 40, 20527, 389, 7318%, 10 32, 1915, 6010% 8819% 2 20 Table 2 The num ber of polym orph ic bands genera ted by 20 pr im er pa irs Primer pair serial number Name of p rimer pair Total number Number of polymorphic bands /% Polymorphic rate Number of distinguishable kind /% D istinguished ability 1 ME21 / EM ME21 / EM ME21 / EM ME21 / EM ME21 / EM ME21 / EM ME22 / EM ME22 / EM ME22 / EM ME23 / EM ME24 / EM ME24 / EM ME26 / EM ME26 / EM ME26 / EM ME26 / EM ME27 / EM ME27 / EM ME27 / EM ME27 / EM SRAP527, 58, Jaccardπs , , 4 ( 2) 1, 45 ;, 2, 3 5 ; 8 4,, 1,,, 3 4

5 12 : SRAP 1841 F ig The dendrogram of phylogenetic rela tion sh ip of 58 cultivars of Petun ia hybrida 3 SRAP,,,, SRAP Cerny (1996) 5 10,,, 58, 1, 3 4,,,,,,

6 (RHS),,,,, Cornu (1984),, ,,,,,,,, 58SRAP,,,, References Budak H, Shearman R C, Parmaksiz I Molecular characterization of buffalograss germplasm using sequence2related amplified polymorphism markers. Theoretical and Applied Genetics, 108: Cerny T A, Caetano2Anoll s G, Trigiano R N, Starman T W Molecular phylogeny and DNA amplification fingerprinting of Petunia taxa. Theor Appl Genet, 92: Cornu A Monographs on theoretical and app lied genetics Sink K C. Petunia. New York: Sp ringer Verlag: Ferriol M, Pico B, Nuez F Genetic diversity of a germp lasm collection of Cucurbita pepo using SRAP and AFLP markers. TheorAppl Gen2 et, (107) : FerriolM, Pico B, Pascual Fernandez de Cordova, Nuez F Molecular diversity of a germplasm collection of squash (Cucurbita m oschata) determ ined by SRAP and AFLP marker. Crop Science, 44: Han Jian2m ing, Hou Xi2lin, Xu Hai2m ing, Shi Gong2jun, Geng Jian2feng, Deng Xiao2hui Genetic differentiation of non2heading Chinese cabbage (B rassica cam pestris ssp. chinensismakino) germp lasm based on SRAP markers. A tca Agronom ica Sinica, 33 (11) : ( in Chinese),,,,, (B rassica cam pestris ssp. chinensis Makino) SRAP., 33 (11) : L i G, Quiros C F Sequence2related amp lified polymorphism ( SRAP), a new marker system based on a simple PCR reaction: Its app lica2 tion to mapping and gene tagging in B rassica. Theoretical and App lied Genetics, 103: L i Hui2zhi, Yin Yan2p ing, Zhang Chun2qing, ZhangM in, L i Jian2m in cultivars of A llium fistulosum L. Acta Horticulturae Sinica, 34 (4) : Evaluation of app lication of SRAP on analysis of genetic diversity in ( in Chinese),,,, SRAP., 34 (4) : L i Yan, Zhang Chun2qing Studies on genetic diversity with a molecularmarker SRAP of watermelon hybrids. Acta Horticulturae Sinica, 32 (4) : ( in Chinese), SRAP., 32 (4) : W ang Yan, Gong Yi2qin, Zhao Tong2m in, L iu Guang, Yu Fan2m in, Ye Hai2long, L iu L i2wang Op tim ization of SRAP2PCR system and cultivar molecular identification in tomato (Lycopersicon esculentum L. ). Journal of Nanjing Agricultural University, 30 (1) : Chinese),,,,,, SRAP2PCR., 30 (1) : ( in

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