Wireless capsule endoscopy video classification using an unsupervised learning approach

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16 11 2011 11 Journal of Image and Graphics Vol. 16 No. 11 Nov. 2011 TP391. 4 A 1006-8961 2011 11-2041-06 Bill P. Buckles. J. 2011 16 11 2041-2046 1 1 Bill P. Buckles 2 1 1 230009 2 76203 WCE WCE WCE SIFT plsa WCE Wireless capsule endoscopy video classification using an unsupervised learning approach Feng Wengang 1 Gao Jun 1 Bill P. Buckles 2 Wu Kewei 1 1 School of Computer and Information Hefei University of Technology Hefei 230009 China 2 Department of Computer and Science University of North Texas Denton 76203 USA Abstract Since Wireless Capsule Endoscopy WCE is a novel technology for recording the videos of the digestive tract of a patient the problem of segmenting the WCE videos of the digestive tract into sub-images corresponding to the mouth stomach small intestine and large intestine regions is not well addressed in the literature. A few papers addressing this problem use a supervised learning approach that presumes availability of a large database of correctly labeled training samples. Considering the difficulties in procuring sizable WCE training data sets needed for achieving high classification accuracy we introduce an unsupervised learning approach that employs Scale invariant feature transform SIFT with color information for extraction of local features and uses probabilistic latent semantic analysis plsa model for data semantic analysis. Our results indicate that this method compares well in classification accuracy with the state-of-the-art supervised classification approach to WCE image classification. Keywords video classification unsupervised learning approach probabilistic latent semantic analysis plsa Scale invariant feature transform SIFT 0 WCE WCE 2010-09-25 2010-11-24 60875012 60905005 DARPA-BAA-10-53 1982 E-mail wengang. feng@ gmail. com

2042 www. cjig. cn 16 11 Spyridonos 1 WCE 5 000 2 /s 12 Cunha WCE 2 3 Mackiewicz 8 4 1 ~ 2 WCE 5 WCE WCE 4 1 4 WCE WCE WCE WCE WCE plsa 13 SIFT 14 plsa SIFT 1 WCE 1 WCE ROI WCE 1 SIFT bag-ofwords SIFT SIFT WCE 2 1 Fig. 1 Four parts of digestive SIFT 6-10 2 Difference of Gaussians 11-12 36 6 MPEG-7 7 6 80% R G B H S V 8 16 16 16 4 4

11 2043 2 b 16 8 128 z k Z = z 1 z K 2 Fig. 2 Image gradient and keypoint descriptor d j plsa SIFT d j WCE D z k RGB w i HSV 4 K hue saturation value 4. 15 Coimbra 16 MPEG-7 plsa HSV WCE Hofmann 23 plsa d j p z HSV 3 k d j p z k p w SIFT SIFT i z k z k 3 384 3 128 p w i d j = Σ K p z k p w i z k p z k d j 1 k = 1 EM RGB p z k p w i z k p z k d j HSV RGB 3 L = logp D W = 384 SIFT M N n w i d j logp w i d j i = 1 j = 1 bag-of-words 2 BOW 17-21 BOW n w i d j w i d j EM E z k P z k d i w j = p z k P w i z k P d i z k 3 22-23 P w j z l P z l d i K M E WCE P z k d i w j p z k P w i z k P d i z k K Σ M n w i d j P z k d j w i i = 1 j = 1 p z 3 600 k = 4 2 plsa plsa M d j D = d 1 d M w i W = w 1 w N N W Σ K l = 1 Σ M n w i d j i = 1 j = 1

2044 www. cjig. cn 16 P w j z k = P z k d i = n d i w j P z k d i w j i = 1 Σ M n d i w m P z k d i w m m = 1 i = 1 Σ M n d i w j P z k d i w j j = 1 n d i 5 6 EM p z k p w i z k 4 p z k d j 1 EM 4 6 4 3 L L p z k d j 3 p z k d j 3 plsa WCE 5 000 4 P1 P2 P3 P4 4 WCE 3 WCE WCE Fig. 3 Flowchart of WCE video classification by unsupervised learning algorithm 1 Fig. 4 4 WCE WCE video classification result 3. 1 1 SIFT SIFT 4 3 SIFT

11 2045 RGB-SIFT plsa Tab. 1 1 1 Experiment 1 results comparison P1 /P2 P2 /P3 P3 /P4 SIFT-SVM-lin 75. 6 73. 2 69. 8 SIFT-SVM-rad 78. 3 77. 3 71. 9 SIFT-pLSA 85. 0 84. 2 80. 4 1 / / SVM-Radial 99. 9 98. 3 94. 7 / 3 SVM-Linear 99. 7 96. 4 89. 1 SVM 3. 3 SVM plsa RGB-SIFT plsa SVM SIFT SVM bag-of-words K plsa 3. 2 2 WCE 300 400 plsa SIFT RGB-SIFT HSV-SIFT 2 RGB-SIFT Tab. 3 3 2 Experiment 2 results comparison P1 /P2 P2 /P3 P3 /P4 plsa-rgb-sift 98. 3 94. 1 93. 9 200 ~ 600 100 5 500 Tab. 2 2 2 Experiment 2 results comparison P1 /P2 P2 /P3 P3 /P4 Gray-SIFT 85. 0 84. 2 80. 4 HSV-SIFT 94. 4 92. 5 91. 0 RGB-SIFT 98. 3 94. 1 93. 9 SVM SIFT 3 RGB-SIFT Fig. 5 plsa Mackiewicz 8 8 SVM 1 4 LBP 3 343 2 41 6 plsa SIFT 3 32 32 HS Hue Saturation plsa 3 RGB-SIFT plsa SIFT SVM SVM SIFT 5 3 Experiment 3 results comparison

2046 www. cjig. cn 16 SIFT SVM SIFT SIFT 27-28 RGB SIFT HSV SIFT SVM Press 2006 161-168. References 1 Krishnan S Wang P Kugean C et al. Classification of endoscopic images based on texture and neural network C / /Proc. of 23rd Annual IEEE Int. Conf. in Engineering in Medicine and Biology. Washington DC IEEE Press 2001 3691-3695. 2 Gay G Delvaux M Key J. The role of video capsule endoscopy in the diagnosis of digestive diseases A review of current possibilities J. Endoscopy 2004 36 3 913-920. 3 Swain P. Wireless capsule endoscopy and Crohn s disease J. Gut 2005 54 4 323-326. 4 Culliford A Daly J Diamond B et al. The value of wireless capsule endoscopy in patients with complicated celiac disease J. Gastrointestinal Endoscopy 2005 62 2 55-61. 5 Maieron A. Multicenter retrospective evaluation of capsule endoscopy in clinical routine J. Endoscopy 2004 36 3 864-868. 6 Coimbra M T Cunha J P S. MPEG-7 visual descriptorscontributions for automated feature extraction in capsule endoscopy J. IEEE Transactions on Circuits and Systems for Video Technology 2006 16 4 628-637. 7 Boulougoura M Wadge E Kodogiannis V S et al. Intelligent systems for computer-assisted clinical endoscopic image analyses C / /Proc. of 2nd Int. Conf. Biomed. Engineering. Innsbruck Austria IEEE Press 2005 405-412. 8 Mackiewicz M Berens J Fisher M. Wireless capsule endoscopy color video segmentation J. IEEE Transactions on Medical Imaging 2008 27 2 1123-1130. 9 Howarth P Yavlinsky A Heesch D et al. Medical image retrieval using texture locality and color C / /Proc. Cross Language Evaluation Forum. Washington DC USA IEEE Press 2005 2 740-749. 10 Wang P Krishman S Kugean C et al. Classification of endoscopic images based on texture and neural network C / / Proc. 23rd Annu. Int. Conf. IEEE Eng. Med. Biol. Sci. Washington DC USA IEEE Press 2001 3691-3695. 11 Spyridonos P Vilarino F Vitria J et al. Anisotropic feature extraction from endoluminal images for detection of intestinal contractions C / /Proc. MICCAI. Washington DC USA IEEE 12 Cunha J Coimbra M Campos P et al. Automated topographic segmentation and transit time estimation in endoscopic capsule exams J. IEEE Trans. Medical. Image 2008 27 1 19-27. 13 Hofmann T. Unsupervised learning by probabilistic latent semantic analysis J. Machine Learning 2001 42 2 177-196. 14 Lowe D G. Distinctive image features from scale-invariant keypoints J. International Journal of Computer Vision 2004 60 2 91-110. 15 Berens J. Image Indexing Using Compressed Color Histograms M. Springer-Verlag Norwich Spinger 2002. 16 Coimbra M Campos P Cunha J P S. MPEG-7 visual descriptors Contributions for automated feature extraction in capsule endoscopy J. IEEE Trans. Circuits Syst. Video Technology 2006 16 4 628-637. 17 Jurie F Triggs B Creating efficient codebooks for visual recognition C / /Proceedings of International Conference on Computer Vision. Washington DC USA IEEE Press 2005 458-465. 18 Bosch A Zisserman A Muoz X. Scene classification using a hybrid generative discriminative approach J. IEEE Transactions on Pattern Analysis and Machine Intelligence 2008 30 3 712-727. 19 Linde Y Buzo A Gray R M. An algorithm for vector quantizer design J. IEEE Transactions on Communications 1980 28 3 84-95. 20 Oliva A Torralba A. Modeling the shape of the scene A holistic representation of the spatial envelope J. International Journal of Computer Vision 2001 42 1 145-175. 21 Niebles J Wang H Li F. Unsupervised learning of human action categories using spatial-temporal words J. International Journal of Computer Vision 2008 32 4 1223-1230. 22 Lloyd S P. Least square quantization in PCM J. IEEE Transactions on Information Theory 1982 28 2 129-137. 23 Li Feifei Perona P. A Bayesian hierarchical model for learning natural scene categories C / /IEEE Conference on Computer Vision and Pattern Recognition. Washington D C USA IEEE Press 2005 524-531.